From 09e7f9c084525b68f88bc6f91ca33cacc7fc2000 Mon Sep 17 00:00:00 2001
From: Sean McBride <spmcbride1201@gmail.com>
Date: Wed, 17 Mar 2021 09:15:29 -0400
Subject: [PATCH 1/9] chore: move by_dpi into ocr dir

---
 runtime/experiments/applications/{ => ocr}/by_dpi/.gitignore | 0
 runtime/experiments/applications/{ => ocr}/by_dpi/README.md  | 0
 runtime/experiments/applications/{ => ocr}/by_dpi/debug.sh   | 2 +-
 runtime/experiments/applications/{ => ocr}/by_dpi/install.sh | 0
 runtime/experiments/applications/{ => ocr}/by_dpi/run.sh     | 2 +-
 runtime/experiments/applications/{ => ocr}/by_dpi/spec.json  | 0
 6 files changed, 2 insertions(+), 2 deletions(-)
 rename runtime/experiments/applications/{ => ocr}/by_dpi/.gitignore (100%)
 rename runtime/experiments/applications/{ => ocr}/by_dpi/README.md (100%)
 rename runtime/experiments/applications/{ => ocr}/by_dpi/debug.sh (94%)
 rename runtime/experiments/applications/{ => ocr}/by_dpi/install.sh (100%)
 rename runtime/experiments/applications/{ => ocr}/by_dpi/run.sh (97%)
 rename runtime/experiments/applications/{ => ocr}/by_dpi/spec.json (100%)

diff --git a/runtime/experiments/applications/by_dpi/.gitignore b/runtime/experiments/applications/ocr/by_dpi/.gitignore
similarity index 100%
rename from runtime/experiments/applications/by_dpi/.gitignore
rename to runtime/experiments/applications/ocr/by_dpi/.gitignore
diff --git a/runtime/experiments/applications/by_dpi/README.md b/runtime/experiments/applications/ocr/by_dpi/README.md
similarity index 100%
rename from runtime/experiments/applications/by_dpi/README.md
rename to runtime/experiments/applications/ocr/by_dpi/README.md
diff --git a/runtime/experiments/applications/by_dpi/debug.sh b/runtime/experiments/applications/ocr/by_dpi/debug.sh
similarity index 94%
rename from runtime/experiments/applications/by_dpi/debug.sh
rename to runtime/experiments/applications/ocr/by_dpi/debug.sh
index a561392..6ab3666 100755
--- a/runtime/experiments/applications/by_dpi/debug.sh
+++ b/runtime/experiments/applications/ocr/by_dpi/debug.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 
 export LD_LIBRARY_PATH="$binary_directory:$LD_LIBRARY_PATH"
diff --git a/runtime/experiments/applications/by_dpi/install.sh b/runtime/experiments/applications/ocr/by_dpi/install.sh
similarity index 100%
rename from runtime/experiments/applications/by_dpi/install.sh
rename to runtime/experiments/applications/ocr/by_dpi/install.sh
diff --git a/runtime/experiments/applications/by_dpi/run.sh b/runtime/experiments/applications/ocr/by_dpi/run.sh
similarity index 97%
rename from runtime/experiments/applications/by_dpi/run.sh
rename to runtime/experiments/applications/ocr/by_dpi/run.sh
index c5f49ce..938a43b 100755
--- a/runtime/experiments/applications/by_dpi/run.sh
+++ b/runtime/experiments/applications/ocr/by_dpi/run.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 log="$experiment_directory/log.csv"
 
diff --git a/runtime/experiments/applications/by_dpi/spec.json b/runtime/experiments/applications/ocr/by_dpi/spec.json
similarity index 100%
rename from runtime/experiments/applications/by_dpi/spec.json
rename to runtime/experiments/applications/ocr/by_dpi/spec.json

From d809869ed76ad073a9361847bf4fb4c6cc51866e Mon Sep 17 00:00:00 2001
From: Sean McBride <spmcbride1201@gmail.com>
Date: Wed, 17 Mar 2021 09:18:48 -0400
Subject: [PATCH 2/9] chore: move by_font into ocr dir

---
 runtime/experiments/applications/{ => ocr}/by_font/.gitignore | 0
 runtime/experiments/applications/{ => ocr}/by_font/README.md  | 0
 runtime/experiments/applications/{ => ocr}/by_font/debug.sh   | 2 +-
 runtime/experiments/applications/{ => ocr}/by_font/install.sh | 0
 runtime/experiments/applications/{ => ocr}/by_font/run.sh     | 2 +-
 runtime/experiments/applications/{ => ocr}/by_font/spec.json  | 0
 6 files changed, 2 insertions(+), 2 deletions(-)
 rename runtime/experiments/applications/{ => ocr}/by_font/.gitignore (100%)
 rename runtime/experiments/applications/{ => ocr}/by_font/README.md (100%)
 rename runtime/experiments/applications/{ => ocr}/by_font/debug.sh (94%)
 rename runtime/experiments/applications/{ => ocr}/by_font/install.sh (100%)
 rename runtime/experiments/applications/{ => ocr}/by_font/run.sh (98%)
 rename runtime/experiments/applications/{ => ocr}/by_font/spec.json (100%)

diff --git a/runtime/experiments/applications/by_font/.gitignore b/runtime/experiments/applications/ocr/by_font/.gitignore
similarity index 100%
rename from runtime/experiments/applications/by_font/.gitignore
rename to runtime/experiments/applications/ocr/by_font/.gitignore
diff --git a/runtime/experiments/applications/by_font/README.md b/runtime/experiments/applications/ocr/by_font/README.md
similarity index 100%
rename from runtime/experiments/applications/by_font/README.md
rename to runtime/experiments/applications/ocr/by_font/README.md
diff --git a/runtime/experiments/applications/by_font/debug.sh b/runtime/experiments/applications/ocr/by_font/debug.sh
similarity index 94%
rename from runtime/experiments/applications/by_font/debug.sh
rename to runtime/experiments/applications/ocr/by_font/debug.sh
index a561392..6ab3666 100755
--- a/runtime/experiments/applications/by_font/debug.sh
+++ b/runtime/experiments/applications/ocr/by_font/debug.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 
 export LD_LIBRARY_PATH="$binary_directory:$LD_LIBRARY_PATH"
diff --git a/runtime/experiments/applications/by_font/install.sh b/runtime/experiments/applications/ocr/by_font/install.sh
similarity index 100%
rename from runtime/experiments/applications/by_font/install.sh
rename to runtime/experiments/applications/ocr/by_font/install.sh
diff --git a/runtime/experiments/applications/by_font/run.sh b/runtime/experiments/applications/ocr/by_font/run.sh
similarity index 98%
rename from runtime/experiments/applications/by_font/run.sh
rename to runtime/experiments/applications/ocr/by_font/run.sh
index 86234ed..cb526a9 100755
--- a/runtime/experiments/applications/by_font/run.sh
+++ b/runtime/experiments/applications/ocr/by_font/run.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 log="$experiment_directory/log.csv"
 
diff --git a/runtime/experiments/applications/by_font/spec.json b/runtime/experiments/applications/ocr/by_font/spec.json
similarity index 100%
rename from runtime/experiments/applications/by_font/spec.json
rename to runtime/experiments/applications/ocr/by_font/spec.json

From bc48284d372fa509f37e25dda999390373fc53fb Mon Sep 17 00:00:00 2001
From: Sean McBride <spmcbride1201@gmail.com>
Date: Wed, 17 Mar 2021 09:22:34 -0400
Subject: [PATCH 3/9] chore: move by_word into ocr dir

---
 runtime/experiments/applications/{ => ocr}/by_word/.gitignore | 0
 runtime/experiments/applications/{ => ocr}/by_word/README.md  | 0
 runtime/experiments/applications/{ => ocr}/by_word/debug.sh   | 2 +-
 runtime/experiments/applications/{ => ocr}/by_word/install.sh | 0
 runtime/experiments/applications/{ => ocr}/by_word/run.sh     | 2 +-
 runtime/experiments/applications/{ => ocr}/by_word/spec.json  | 0
 6 files changed, 2 insertions(+), 2 deletions(-)
 rename runtime/experiments/applications/{ => ocr}/by_word/.gitignore (100%)
 rename runtime/experiments/applications/{ => ocr}/by_word/README.md (100%)
 rename runtime/experiments/applications/{ => ocr}/by_word/debug.sh (94%)
 rename runtime/experiments/applications/{ => ocr}/by_word/install.sh (100%)
 rename runtime/experiments/applications/{ => ocr}/by_word/run.sh (97%)
 rename runtime/experiments/applications/{ => ocr}/by_word/spec.json (100%)

diff --git a/runtime/experiments/applications/by_word/.gitignore b/runtime/experiments/applications/ocr/by_word/.gitignore
similarity index 100%
rename from runtime/experiments/applications/by_word/.gitignore
rename to runtime/experiments/applications/ocr/by_word/.gitignore
diff --git a/runtime/experiments/applications/by_word/README.md b/runtime/experiments/applications/ocr/by_word/README.md
similarity index 100%
rename from runtime/experiments/applications/by_word/README.md
rename to runtime/experiments/applications/ocr/by_word/README.md
diff --git a/runtime/experiments/applications/by_word/debug.sh b/runtime/experiments/applications/ocr/by_word/debug.sh
similarity index 94%
rename from runtime/experiments/applications/by_word/debug.sh
rename to runtime/experiments/applications/ocr/by_word/debug.sh
index a561392..6ab3666 100755
--- a/runtime/experiments/applications/by_word/debug.sh
+++ b/runtime/experiments/applications/ocr/by_word/debug.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 
 export LD_LIBRARY_PATH="$binary_directory:$LD_LIBRARY_PATH"
diff --git a/runtime/experiments/applications/by_word/install.sh b/runtime/experiments/applications/ocr/by_word/install.sh
similarity index 100%
rename from runtime/experiments/applications/by_word/install.sh
rename to runtime/experiments/applications/ocr/by_word/install.sh
diff --git a/runtime/experiments/applications/by_word/run.sh b/runtime/experiments/applications/ocr/by_word/run.sh
similarity index 97%
rename from runtime/experiments/applications/by_word/run.sh
rename to runtime/experiments/applications/ocr/by_word/run.sh
index e4a4354..f1f098a 100755
--- a/runtime/experiments/applications/by_word/run.sh
+++ b/runtime/experiments/applications/ocr/by_word/run.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 log="$experiment_directory/log.csv"
 
diff --git a/runtime/experiments/applications/by_word/spec.json b/runtime/experiments/applications/ocr/by_word/spec.json
similarity index 100%
rename from runtime/experiments/applications/by_word/spec.json
rename to runtime/experiments/applications/ocr/by_word/spec.json

From c93c380771673718a1ec59b99dabf1a5e1b7f94a Mon Sep 17 00:00:00 2001
From: Sean McBride <spmcbride1201@gmail.com>
Date: Wed, 17 Mar 2021 09:25:38 -0400
Subject: [PATCH 4/9] chore: move hyde into ocr dir

---
 .../applications/{ => ocr}/hyde/README.md           |   0
 .../applications/{ => ocr}/hyde/debug.sh            |   2 +-
 .../applications/{ => ocr}/hyde/expected_result.txt |   0
 .../applications/{ => ocr}/hyde/hyde.jpg            | Bin
 .../applications/{ => ocr}/hyde/hyde.pnm            |   0
 .../experiments/applications/{ => ocr}/hyde/run.sh  |   2 +-
 .../applications/{ => ocr}/hyde/spec.json           |   0
 7 files changed, 2 insertions(+), 2 deletions(-)
 rename runtime/experiments/applications/{ => ocr}/hyde/README.md (100%)
 rename runtime/experiments/applications/{ => ocr}/hyde/debug.sh (94%)
 rename runtime/experiments/applications/{ => ocr}/hyde/expected_result.txt (100%)
 rename runtime/experiments/applications/{ => ocr}/hyde/hyde.jpg (100%)
 rename runtime/experiments/applications/{ => ocr}/hyde/hyde.pnm (100%)
 rename runtime/experiments/applications/{ => ocr}/hyde/run.sh (96%)
 rename runtime/experiments/applications/{ => ocr}/hyde/spec.json (100%)

diff --git a/runtime/experiments/applications/hyde/README.md b/runtime/experiments/applications/ocr/hyde/README.md
similarity index 100%
rename from runtime/experiments/applications/hyde/README.md
rename to runtime/experiments/applications/ocr/hyde/README.md
diff --git a/runtime/experiments/applications/hyde/debug.sh b/runtime/experiments/applications/ocr/hyde/debug.sh
similarity index 94%
rename from runtime/experiments/applications/hyde/debug.sh
rename to runtime/experiments/applications/ocr/hyde/debug.sh
index a561392..6ab3666 100755
--- a/runtime/experiments/applications/hyde/debug.sh
+++ b/runtime/experiments/applications/ocr/hyde/debug.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 
 export LD_LIBRARY_PATH="$binary_directory:$LD_LIBRARY_PATH"
diff --git a/runtime/experiments/applications/hyde/expected_result.txt b/runtime/experiments/applications/ocr/hyde/expected_result.txt
similarity index 100%
rename from runtime/experiments/applications/hyde/expected_result.txt
rename to runtime/experiments/applications/ocr/hyde/expected_result.txt
diff --git a/runtime/experiments/applications/hyde/hyde.jpg b/runtime/experiments/applications/ocr/hyde/hyde.jpg
similarity index 100%
rename from runtime/experiments/applications/hyde/hyde.jpg
rename to runtime/experiments/applications/ocr/hyde/hyde.jpg
diff --git a/runtime/experiments/applications/hyde/hyde.pnm b/runtime/experiments/applications/ocr/hyde/hyde.pnm
similarity index 100%
rename from runtime/experiments/applications/hyde/hyde.pnm
rename to runtime/experiments/applications/ocr/hyde/hyde.pnm
diff --git a/runtime/experiments/applications/hyde/run.sh b/runtime/experiments/applications/ocr/hyde/run.sh
similarity index 96%
rename from runtime/experiments/applications/hyde/run.sh
rename to runtime/experiments/applications/ocr/hyde/run.sh
index 32a6d6d..2d46d22 100755
--- a/runtime/experiments/applications/hyde/run.sh
+++ b/runtime/experiments/applications/ocr/hyde/run.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 
 if [ "$1" != "-d" ]; then
diff --git a/runtime/experiments/applications/hyde/spec.json b/runtime/experiments/applications/ocr/hyde/spec.json
similarity index 100%
rename from runtime/experiments/applications/hyde/spec.json
rename to runtime/experiments/applications/ocr/hyde/spec.json

From e2a30d873d835e01bcc375cd9915aab216da949a Mon Sep 17 00:00:00 2001
From: Sean McBride <spmcbride1201@gmail.com>
Date: Wed, 17 Mar 2021 09:27:58 -0400
Subject: [PATCH 5/9] chore: move fivebyeight into ocr dir

---
 .../applications/{ => ocr}/fivebyeight/5x8.png      | Bin
 .../applications/{ => ocr}/fivebyeight/5x8.pnm      |   0
 .../applications/{ => ocr}/fivebyeight/README.md    |   0
 .../applications/{ => ocr}/fivebyeight/debug.sh     |   2 +-
 .../{ => ocr}/fivebyeight/expected_result.txt       |   0
 .../applications/{ => ocr}/fivebyeight/run.sh       |   2 +-
 .../applications/{ => ocr}/fivebyeight/spec.json    |   0
 7 files changed, 2 insertions(+), 2 deletions(-)
 rename runtime/experiments/applications/{ => ocr}/fivebyeight/5x8.png (100%)
 rename runtime/experiments/applications/{ => ocr}/fivebyeight/5x8.pnm (100%)
 rename runtime/experiments/applications/{ => ocr}/fivebyeight/README.md (100%)
 rename runtime/experiments/applications/{ => ocr}/fivebyeight/debug.sh (94%)
 rename runtime/experiments/applications/{ => ocr}/fivebyeight/expected_result.txt (100%)
 rename runtime/experiments/applications/{ => ocr}/fivebyeight/run.sh (96%)
 rename runtime/experiments/applications/{ => ocr}/fivebyeight/spec.json (100%)

diff --git a/runtime/experiments/applications/fivebyeight/5x8.png b/runtime/experiments/applications/ocr/fivebyeight/5x8.png
similarity index 100%
rename from runtime/experiments/applications/fivebyeight/5x8.png
rename to runtime/experiments/applications/ocr/fivebyeight/5x8.png
diff --git a/runtime/experiments/applications/fivebyeight/5x8.pnm b/runtime/experiments/applications/ocr/fivebyeight/5x8.pnm
similarity index 100%
rename from runtime/experiments/applications/fivebyeight/5x8.pnm
rename to runtime/experiments/applications/ocr/fivebyeight/5x8.pnm
diff --git a/runtime/experiments/applications/fivebyeight/README.md b/runtime/experiments/applications/ocr/fivebyeight/README.md
similarity index 100%
rename from runtime/experiments/applications/fivebyeight/README.md
rename to runtime/experiments/applications/ocr/fivebyeight/README.md
diff --git a/runtime/experiments/applications/fivebyeight/debug.sh b/runtime/experiments/applications/ocr/fivebyeight/debug.sh
similarity index 94%
rename from runtime/experiments/applications/fivebyeight/debug.sh
rename to runtime/experiments/applications/ocr/fivebyeight/debug.sh
index a561392..6ab3666 100755
--- a/runtime/experiments/applications/fivebyeight/debug.sh
+++ b/runtime/experiments/applications/ocr/fivebyeight/debug.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 
 export LD_LIBRARY_PATH="$binary_directory:$LD_LIBRARY_PATH"
diff --git a/runtime/experiments/applications/fivebyeight/expected_result.txt b/runtime/experiments/applications/ocr/fivebyeight/expected_result.txt
similarity index 100%
rename from runtime/experiments/applications/fivebyeight/expected_result.txt
rename to runtime/experiments/applications/ocr/fivebyeight/expected_result.txt
diff --git a/runtime/experiments/applications/fivebyeight/run.sh b/runtime/experiments/applications/ocr/fivebyeight/run.sh
similarity index 96%
rename from runtime/experiments/applications/fivebyeight/run.sh
rename to runtime/experiments/applications/ocr/fivebyeight/run.sh
index 3271539..812308d 100755
--- a/runtime/experiments/applications/fivebyeight/run.sh
+++ b/runtime/experiments/applications/ocr/fivebyeight/run.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 
 if [ "$1" != "-d" ]; then
diff --git a/runtime/experiments/applications/fivebyeight/spec.json b/runtime/experiments/applications/ocr/fivebyeight/spec.json
similarity index 100%
rename from runtime/experiments/applications/fivebyeight/spec.json
rename to runtime/experiments/applications/ocr/fivebyeight/spec.json

From a8193d50cdec60043270bd141cd70e44ded3d202 Mon Sep 17 00:00:00 2001
From: Sean McBride <spmcbride1201@gmail.com>
Date: Wed, 17 Mar 2021 09:29:46 -0400
Subject: [PATCH 6/9] chore: move handwriting into ocr dir

---
 .../applications/{ => ocr}/handwriting/debug.sh     |   2 +-
 .../{ => ocr}/handwriting/expected_result.txt       |   0
 .../applications/{ => ocr}/handwriting/handwrt1.jpg | Bin
 .../applications/{ => ocr}/handwriting/handwrt1.pnm |   0
 .../applications/{ => ocr}/handwriting/run.sh       |   2 +-
 .../applications/{ => ocr}/handwriting/spec.json    |   0
 6 files changed, 2 insertions(+), 2 deletions(-)
 rename runtime/experiments/applications/{ => ocr}/handwriting/debug.sh (94%)
 rename runtime/experiments/applications/{ => ocr}/handwriting/expected_result.txt (100%)
 rename runtime/experiments/applications/{ => ocr}/handwriting/handwrt1.jpg (100%)
 rename runtime/experiments/applications/{ => ocr}/handwriting/handwrt1.pnm (100%)
 rename runtime/experiments/applications/{ => ocr}/handwriting/run.sh (96%)
 rename runtime/experiments/applications/{ => ocr}/handwriting/spec.json (100%)

diff --git a/runtime/experiments/applications/handwriting/debug.sh b/runtime/experiments/applications/ocr/handwriting/debug.sh
similarity index 94%
rename from runtime/experiments/applications/handwriting/debug.sh
rename to runtime/experiments/applications/ocr/handwriting/debug.sh
index a561392..6ab3666 100755
--- a/runtime/experiments/applications/handwriting/debug.sh
+++ b/runtime/experiments/applications/ocr/handwriting/debug.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 
 export LD_LIBRARY_PATH="$binary_directory:$LD_LIBRARY_PATH"
diff --git a/runtime/experiments/applications/handwriting/expected_result.txt b/runtime/experiments/applications/ocr/handwriting/expected_result.txt
similarity index 100%
rename from runtime/experiments/applications/handwriting/expected_result.txt
rename to runtime/experiments/applications/ocr/handwriting/expected_result.txt
diff --git a/runtime/experiments/applications/handwriting/handwrt1.jpg b/runtime/experiments/applications/ocr/handwriting/handwrt1.jpg
similarity index 100%
rename from runtime/experiments/applications/handwriting/handwrt1.jpg
rename to runtime/experiments/applications/ocr/handwriting/handwrt1.jpg
diff --git a/runtime/experiments/applications/handwriting/handwrt1.pnm b/runtime/experiments/applications/ocr/handwriting/handwrt1.pnm
similarity index 100%
rename from runtime/experiments/applications/handwriting/handwrt1.pnm
rename to runtime/experiments/applications/ocr/handwriting/handwrt1.pnm
diff --git a/runtime/experiments/applications/handwriting/run.sh b/runtime/experiments/applications/ocr/handwriting/run.sh
similarity index 96%
rename from runtime/experiments/applications/handwriting/run.sh
rename to runtime/experiments/applications/ocr/handwriting/run.sh
index f6d2287..ed4ec16 100755
--- a/runtime/experiments/applications/handwriting/run.sh
+++ b/runtime/experiments/applications/ocr/handwriting/run.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 
 if [ "$1" != "-d" ]; then
diff --git a/runtime/experiments/applications/handwriting/spec.json b/runtime/experiments/applications/ocr/handwriting/spec.json
similarity index 100%
rename from runtime/experiments/applications/handwriting/spec.json
rename to runtime/experiments/applications/ocr/handwriting/spec.json

From 1f2d2cea9002dd333f517f6ea1df28c46cd850d0 Mon Sep 17 00:00:00 2001
From: Sean McBride <spmcbride1201@gmail.com>
Date: Wed, 17 Mar 2021 10:21:23 -0400
Subject: [PATCH 7/9] chore: Move one_iteration test

---
 .../applications/ekf/{ => one_iteration}/.gitignore |   0
 .../applications/ekf/{ => one_iteration}/README.md  |   0
 .../applications/ekf/{ => one_iteration}/debug.sh   |   2 +-
 .../ekf/{ => one_iteration}/ekf_raw.dat             | Bin
 .../ekf/{ => one_iteration}/expected_result.dat     | Bin
 .../applications/ekf/{ => one_iteration}/run.sh     |   2 +-
 .../applications/ekf/{ => one_iteration}/spec.json  |   0
 7 files changed, 2 insertions(+), 2 deletions(-)
 rename runtime/experiments/applications/ekf/{ => one_iteration}/.gitignore (100%)
 rename runtime/experiments/applications/ekf/{ => one_iteration}/README.md (100%)
 rename runtime/experiments/applications/ekf/{ => one_iteration}/debug.sh (94%)
 rename runtime/experiments/applications/ekf/{ => one_iteration}/ekf_raw.dat (100%)
 rename runtime/experiments/applications/ekf/{ => one_iteration}/expected_result.dat (100%)
 rename runtime/experiments/applications/ekf/{ => one_iteration}/run.sh (96%)
 rename runtime/experiments/applications/ekf/{ => one_iteration}/spec.json (100%)

diff --git a/runtime/experiments/applications/ekf/.gitignore b/runtime/experiments/applications/ekf/one_iteration/.gitignore
similarity index 100%
rename from runtime/experiments/applications/ekf/.gitignore
rename to runtime/experiments/applications/ekf/one_iteration/.gitignore
diff --git a/runtime/experiments/applications/ekf/README.md b/runtime/experiments/applications/ekf/one_iteration/README.md
similarity index 100%
rename from runtime/experiments/applications/ekf/README.md
rename to runtime/experiments/applications/ekf/one_iteration/README.md
diff --git a/runtime/experiments/applications/ekf/debug.sh b/runtime/experiments/applications/ekf/one_iteration/debug.sh
similarity index 94%
rename from runtime/experiments/applications/ekf/debug.sh
rename to runtime/experiments/applications/ekf/one_iteration/debug.sh
index a561392..6ab3666 100755
--- a/runtime/experiments/applications/ekf/debug.sh
+++ b/runtime/experiments/applications/ekf/one_iteration/debug.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 
 export LD_LIBRARY_PATH="$binary_directory:$LD_LIBRARY_PATH"
diff --git a/runtime/experiments/applications/ekf/ekf_raw.dat b/runtime/experiments/applications/ekf/one_iteration/ekf_raw.dat
similarity index 100%
rename from runtime/experiments/applications/ekf/ekf_raw.dat
rename to runtime/experiments/applications/ekf/one_iteration/ekf_raw.dat
diff --git a/runtime/experiments/applications/ekf/expected_result.dat b/runtime/experiments/applications/ekf/one_iteration/expected_result.dat
similarity index 100%
rename from runtime/experiments/applications/ekf/expected_result.dat
rename to runtime/experiments/applications/ekf/one_iteration/expected_result.dat
diff --git a/runtime/experiments/applications/ekf/run.sh b/runtime/experiments/applications/ekf/one_iteration/run.sh
similarity index 96%
rename from runtime/experiments/applications/ekf/run.sh
rename to runtime/experiments/applications/ekf/one_iteration/run.sh
index dde0d66..0eb5dae 100755
--- a/runtime/experiments/applications/ekf/run.sh
+++ b/runtime/experiments/applications/ekf/one_iteration/run.sh
@@ -5,7 +5,7 @@
 # Also disables pagination and stopping on SIGUSR1
 
 experiment_directory=$(pwd)
-project_directory=$(cd ../../.. && pwd)
+project_directory=$(cd ../../../.. && pwd)
 binary_directory=$(cd "$project_directory"/bin && pwd)
 
 # Copy data if not here
diff --git a/runtime/experiments/applications/ekf/spec.json b/runtime/experiments/applications/ekf/one_iteration/spec.json
similarity index 100%
rename from runtime/experiments/applications/ekf/spec.json
rename to runtime/experiments/applications/ekf/one_iteration/spec.json

From b0a4f9f662c05f021608809fc50fbc633fbc9091 Mon Sep 17 00:00:00 2001
From: Sean McBride <spmcbride1201@gmail.com>
Date: Wed, 17 Mar 2021 11:06:49 -0400
Subject: [PATCH 8/9] test: ekf by_iter

---
 .../applications/ekf/by_iteration/.gitignore  |   3 +
 .../applications/ekf/by_iteration/README.md   |   9 +++
 .../applications/ekf/by_iteration/debug.sh    |  19 +++++++
 .../ekf/by_iteration/initial_state.dat        | Bin 0 -> 5088 bytes
 .../ekf/by_iteration/one_iteration.dat        | Bin 0 -> 5088 bytes
 .../applications/ekf/by_iteration/run.sh      |  53 ++++++++++++++++++
 .../applications/ekf/by_iteration/spec.json   |  42 ++++++++++++++
 .../ekf/by_iteration/three_iterations.dat     | Bin 0 -> 5088 bytes
 .../ekf/by_iteration/two_iterations.dat       | Bin 0 -> 5088 bytes
 9 files changed, 126 insertions(+)
 create mode 100644 runtime/experiments/applications/ekf/by_iteration/.gitignore
 create mode 100644 runtime/experiments/applications/ekf/by_iteration/README.md
 create mode 100755 runtime/experiments/applications/ekf/by_iteration/debug.sh
 create mode 100644 runtime/experiments/applications/ekf/by_iteration/initial_state.dat
 create mode 100644 runtime/experiments/applications/ekf/by_iteration/one_iteration.dat
 create mode 100755 runtime/experiments/applications/ekf/by_iteration/run.sh
 create mode 100644 runtime/experiments/applications/ekf/by_iteration/spec.json
 create mode 100644 runtime/experiments/applications/ekf/by_iteration/three_iterations.dat
 create mode 100644 runtime/experiments/applications/ekf/by_iteration/two_iterations.dat

diff --git a/runtime/experiments/applications/ekf/by_iteration/.gitignore b/runtime/experiments/applications/ekf/by_iteration/.gitignore
new file mode 100644
index 0000000..343f11e
--- /dev/null
+++ b/runtime/experiments/applications/ekf/by_iteration/.gitignore
@@ -0,0 +1,3 @@
+*res.dat
+rt.log
+log.csv
diff --git a/runtime/experiments/applications/ekf/by_iteration/README.md b/runtime/experiments/applications/ekf/by_iteration/README.md
new file mode 100644
index 0000000..20079c5
--- /dev/null
+++ b/runtime/experiments/applications/ekf/by_iteration/README.md
@@ -0,0 +1,9 @@
+# EKF
+
+Executes TinyEKF as shows by [You Chong's GPS example](http://www.mathworks.com/matlabcentral/fileexchange/31487-extended-kalman-filter-ekf--for-gps)
+
+In order to be compatible with the stdin/stdout model of serverless, the input and output files are binary concatenations of various C structs.
+
+See `main()` in `runtime/tests/TinyEKF/extras/c/gps_ekf_fn.c` for specifics.
+
+This test executes multiple iterations, comparing the binary result against a known memoized result stored at `expected_result.dat`.
diff --git a/runtime/experiments/applications/ekf/by_iteration/debug.sh b/runtime/experiments/applications/ekf/by_iteration/debug.sh
new file mode 100755
index 0000000..6ab3666
--- /dev/null
+++ b/runtime/experiments/applications/ekf/by_iteration/debug.sh
@@ -0,0 +1,19 @@
+#!/bin/bash
+# Executes the runtime in GDB
+# Substitutes the absolute path from the container with a path relatively derived from the location of this script
+# This allows debugging outside of the Docker container
+# Also disables pagination and stopping on SIGUSR1
+
+experiment_directory=$(pwd)
+project_directory=$(cd ../../../.. && pwd)
+binary_directory=$(cd "$project_directory"/bin && pwd)
+
+export LD_LIBRARY_PATH="$binary_directory:$LD_LIBRARY_PATH"
+export PATH="$binary_directory:$PATH"
+
+gdb --eval-command="handle SIGUSR1 nostop" \
+  --eval-command="handle SIGPIPE nostop" \
+  --eval-command="set pagination off" \
+  --eval-command="set substitute-path /sledge/runtime $project_directory" \
+  --eval-command="run $experiment_directory/spec.json" \
+  sledgert
diff --git a/runtime/experiments/applications/ekf/by_iteration/initial_state.dat b/runtime/experiments/applications/ekf/by_iteration/initial_state.dat
new file mode 100644
index 0000000000000000000000000000000000000000..9a960e1e986d6142e00a0c8c803f8c9463a7e541
GIT binary patch
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diff --git a/runtime/experiments/applications/ekf/by_iteration/one_iteration.dat b/runtime/experiments/applications/ekf/by_iteration/one_iteration.dat
new file mode 100644
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HcmV?d00001

diff --git a/runtime/experiments/applications/ekf/by_iteration/run.sh b/runtime/experiments/applications/ekf/by_iteration/run.sh
new file mode 100755
index 0000000..870dca1
--- /dev/null
+++ b/runtime/experiments/applications/ekf/by_iteration/run.sh
@@ -0,0 +1,53 @@
+#!/bin/bash
+# Executes the runtime in GDB
+# Substitutes the absolute path from the container with a path relatively derived from the location of this script
+# This allows debugging outside of the Docker container
+# Also disables pagination and stopping on SIGUSR1
+
+experiment_directory=$(pwd)
+runtime_directory=$(cd ../../../.. && pwd)
+binary_directory=$(cd "$runtime_directory"/bin && pwd)
+log="$experiment_directory/log.csv"
+
+# Copy data if not here
+if [[ ! -f "./initial_state.dat" ]]; then
+  cp $runtime_directory/tests/TinyEKF/extras/c/ekf_raw.dat ./initial_state.dat
+fi
+
+if [ "$1" != "-d" ]; then
+  SLEDGE_SANDBOX_PERF_LOG=$log PATH="$binary_directory:$PATH" LD_LIBRARY_PATH="$binary_directory:$LD_LIBRARY_PATH" sledgert "$experiment_directory/spec.json" >rt.log 2>&1 &
+  sleep 2
+else
+  echo "Running under gdb"
+fi
+
+one_iteration_expected_result="$(tr -d '\0' <./one_iteration.dat)"
+two_iterations_expected_result="$(tr -d '\0' <./two_iterations.dat)"
+three_iterations_expected_result="$(tr -d '\0' <./three_iterations.dat)"
+
+success_count=0
+total_count=50
+
+for ((i = 0; i < total_count; i++)); do
+  echo "$i"
+  curl -H 'Expect:' -H "Content-Type: application/octet-stream" --data-binary "@initial_state.dat" localhost:10000 2>/dev/null >./one_iteration_res.dat
+  curl -H 'Expect:' -H "Content-Type: application/octet-stream" --data-binary "@one_iteration_res.dat" localhost:10001 2>/dev/null >./two_iterations_res.dat
+  curl -H 'Expect:' -H "Content-Type: application/octet-stream" --data-binary "@two_iterations_res.dat" localhost:10002 2>/dev/null >./three_iterations_res.dat
+  if diff -s one_iteration_res.dat one_iteration.dat && diff -s two_iterations_res.dat two_iterations.dat && diff -s three_iterations_res.dat three_iterations.dat; then
+    success_count=$((success_count + 1))
+  else
+    echo "FAIL"
+    exit
+  fi
+
+  rm *_res.dat
+done
+
+echo "$success_count / $total_count"
+
+if [ "$1" != "-d" ]; then
+  sleep 5
+  echo -n "Running Cleanup: "
+  pkill sledgert >/dev/null 2>/dev/null
+  echo "[DONE]"
+fi
diff --git a/runtime/experiments/applications/ekf/by_iteration/spec.json b/runtime/experiments/applications/ekf/by_iteration/spec.json
new file mode 100644
index 0000000..2043944
--- /dev/null
+++ b/runtime/experiments/applications/ekf/by_iteration/spec.json
@@ -0,0 +1,42 @@
+{
+  "active": "yes",
+  "name": "ekf_first_iter",
+  "path": "ekf_wasm.so",
+  "port": 10000,
+  "relative-deadline-us": 50000,
+  "argsize": 1,
+  "http-req-headers": [],
+  "http-req-content-type": "application/octet-stream",
+  "http-req-size": 1024000,
+  "http-resp-headers": [],
+  "http-resp-size": 1024000,
+  "http-resp-content-type": "application/octet-stream"
+},
+{
+  "active": "yes",
+  "name": "ekf_second_iter",
+  "path": "ekf_wasm.so",
+  "port": 10001,
+  "relative-deadline-us": 50000,
+  "argsize": 1,
+  "http-req-headers": [],
+  "http-req-content-type": "application/octet-stream",
+  "http-req-size": 1024000,
+  "http-resp-headers": [],
+  "http-resp-size": 1024000,
+  "http-resp-content-type": "application/octet-stream"
+},
+{
+  "active": "yes",
+  "name": "ekf_third_iter",
+  "path": "ekf_wasm.so",
+  "port": 10002,
+  "relative-deadline-us": 50000,
+  "argsize": 1,
+  "http-req-headers": [],
+  "http-req-content-type": "application/octet-stream",
+  "http-req-size": 1024000,
+  "http-resp-headers": [],
+  "http-resp-size": 1024000,
+  "http-resp-content-type": "application/octet-stream"
+}
diff --git a/runtime/experiments/applications/ekf/by_iteration/three_iterations.dat b/runtime/experiments/applications/ekf/by_iteration/three_iterations.dat
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From 8f1e68857ea88e6d1c7c88e04d4e29c5a5fa73cc Mon Sep 17 00:00:00 2001
From: Sean McBride <spmcbride1201@gmail.com>
Date: Wed, 17 Mar 2021 11:11:08 -0400
Subject: [PATCH 9/9] docs: Update by_iter readme

---
 runtime/experiments/applications/ekf/by_iteration/README.md | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/runtime/experiments/applications/ekf/by_iteration/README.md b/runtime/experiments/applications/ekf/by_iteration/README.md
index 20079c5..3dd556d 100644
--- a/runtime/experiments/applications/ekf/by_iteration/README.md
+++ b/runtime/experiments/applications/ekf/by_iteration/README.md
@@ -2,8 +2,10 @@
 
 Executes TinyEKF as shows by [You Chong's GPS example](http://www.mathworks.com/matlabcentral/fileexchange/31487-extended-kalman-filter-ekf--for-gps)
 
+This test executes multiple runs of three iterations (the output of a previous iteration is refed as input), comparing the binary result against a known memoized result stored in `initial_state.dat`, `one_iteration.dat`, `two_iterations.dat`, and `three_iterations.dat`.
+
+The `rust.sh` script stores per-run results to temporary files suffixed with `*.res.dat` and `diff -s` because I had trouble using cURL to pass a bash string of binary input.
+
 In order to be compatible with the stdin/stdout model of serverless, the input and output files are binary concatenations of various C structs.
 
 See `main()` in `runtime/tests/TinyEKF/extras/c/gps_ekf_fn.c` for specifics.
-
-This test executes multiple iterations, comparing the binary result against a known memoized result stored at `expected_result.dat`.